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PopSc

PopSc is a toolkit for computing 45 basic statistics in molecular population genetics, mainly including (i) genetic diversity of DNA sequences, (ii) statistical tests for neutral evolution, and (iii) measures of genetic differentiation among populations. PopSc was independently implemented in Python library, R package, and web-based calculator ... ...

bioOTU

bioOTU is a computational tool for operational taxonomic units (OTUs) clustering of 16s rRNA gene sequences in microbial studies by the high-throughput sequencing techniques, which aims at two improvements in algorithm, including (i) to effectively distinguish the error-free sequences from potential error sequences from known species in reference database and ... ...

dbHT-Trans

dbHT-Trans is an efficient tool for filtering the protein-encoding transcripts as being assembled by RNA-Seq according to search for homologous proteins. In RNA-Seq studies, the post-assembly quality filtering is necessary before performing downstream analyses. In theory, it is expected that the falsely assembled transcripts of protein-encoding genes will ... ...

about us

Our research interest is mainly occupied by the area of genetics & breeding in domesticated animals. During past years, techniques of high-throughput sequencing (HTS), such as the transcriptome, microRNAome, and 16s rRNA gene-based microbiome sequencing, have been employed into our studies, and ... ...

about us

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